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    ube2e3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [ Salmo salar (Atlantic salmon) ]

    Gene ID: 100194512, updated on 29-Apr-2017

    Summary

    Gene symbol
    ube2e3
    Gene description
    ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmo salar
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo

    Genomic context

    See ube2e3 in Genome Data Viewer
    Location:
    chromosome: ssa25
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ICSASG_v2 (GCF_000233375.1) ssa25 NC_027324.1 (26759801..26797757)

    Chromosome ssa25 - NC_027324.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 385B-like Neighboring gene uncharacterized LOC106586463 Neighboring gene pre-mRNA-splicing factor CWC22 homolog Neighboring gene ceramide kinase-like protein Neighboring gene integrin subunit alpha 4

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_027324.1 Chromosome ssa25 Reference ICSASG_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Ubiquitin mediated proteolysis, organism-specific biosystem (from KEGG)
      Ubiquitin mediated proteolysis, organism-specific biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
    • Ubiquitin mediated proteolysis, conserved biosystem (from KEGG)
      Ubiquitin mediated proteolysis, conserved biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...

    General protein information

    Preferred Names
    ubiquitin-conjugating enzyme E2 E3
    NP_001133070.1
    XP_014029110.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001139598.1NP_001133070.1  ubiquitin-conjugating enzyme E2 E3

      See identical proteins and their annotated locations for NP_001133070.1

      Status: PROVISIONAL

      Source sequence(s)
      BT043519
      UniProtKB/TrEMBL
      B5DFW0
      Conserved Domains (2) summary
      COG5078
      Location:61207
      COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
      pfam00179
      Location:66203
      UQ_con; Ubiquitin-conjugating enzyme

    RefSeqs of Annotated Genomes: Salmo salar Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ICSASG_v2 Primary Assembly

    Genomic

    1. NC_027324.1 Reference ICSASG_v2 Primary Assembly

      Range
      26759801..26797757
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014173635.1XP_014029110.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      B5DFW0
      Conserved Domains (2) summary
      COG5078
      Location:61207
      COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
      pfam00179
      Location:66203
      UQ_con; Ubiquitin-conjugating enzyme
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