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    TUBB1 tubulin beta 1 class VI [ Felis catus (domestic cat) ]

    Gene ID: 100188929, updated on 7-Oct-2019

    Summary

    Official Symbol
    TUBB1
    Official Full Name
    tubulin beta 1 class VI
    Primary source
    VGNC:VGNC:81254
    See related
    Ensembl:ENSFCAG00000014627
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs

    Genomic context

    See TUBB1 in Genome Data Viewer
    Location:
    chromosome: A3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current Felis_catus_9.0 (GCF_000181335.3) A3 NC_018725.3 (4504468..4511604, complement)
    103 previous assembly Felis_catus_8.0 (GCF_000181335.2) A3 NC_018725.2 (4314507..4320212, complement)
    101 previous assembly Felis_catus-6.2 (GCF_000181335.1) A3 NC_018725.1 (4248711..4253627, complement)

    Chromosome A3 - NC_018725.3Genomic Context describing neighboring genes Neighboring gene zinc finger protein 831 Neighboring gene 28S ribosomal protein S36, mitochondrial pseudogene Neighboring gene PRELI domain containing 3B Neighboring gene ATP synthase F1 subunit epsilon Neighboring gene cathepsin Z Neighboring gene negative elongation factor complex member C/D

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Gap junction, organism-specific biosystem (from KEGG)
      Gap junction, organism-specific biosystemGap junctions contain intercellular channels that allow direct communication between the cytosolic compartments of adjacent cells. Each gap junction channel is formed by docking of two 'hemichannels'...
    • Gap junction, conserved biosystem (from KEGG)
      Gap junction, conserved biosystemGap junctions contain intercellular channels that allow direct communication between the cytosolic compartments of adjacent cells. Each gap junction channel is formed by docking of two 'hemichannels'...
    • Phagosome, organism-specific biosystem (from KEGG)
      Phagosome, organism-specific biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...
    • Phagosome, conserved biosystem (from KEGG)
      Phagosome, conserved biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134989.1NP_001128461.1  tubulin beta-1 chain

      See identical proteins and their annotated locations for NP_001128461.1

      Status: PROVISIONAL

      Source sequence(s)
      EU918290
      UniProtKB/TrEMBL
      B5LX42
      Related
      ENSFCAP00000006008.5, ENSFCAT00000006467.6
      Conserved Domains (2) summary
      PLN00220
      Location:1447
      PLN00220; tubulin beta chain; Provisional
      cd02187
      Location:2426
      beta_tubulin; The beta-tubulin family

    RefSeqs of Annotated Genomes: Felis catus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Felis_catus_9.0 Primary Assembly

    Genomic

    1. NC_018725.3 Reference Felis_catus_9.0 Primary Assembly

      Range
      4504468..4511604 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023250905.1XP_023106673.1  tubulin beta-1 chain isoform X1

      Conserved Domains (1) summary
      PLN00220
      Location:1375
      PLN00220; tubulin beta chain; Provisional
    2. XM_023250906.1XP_023106674.1  tubulin beta-1 chain isoform X1

      Conserved Domains (1) summary
      PLN00220
      Location:1375
      PLN00220; tubulin beta chain; Provisional
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