Format

Send to:

Choose Destination
    • Showing Current items.

    B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100174453, updated on 14-Oct-2018

    Summary

    Gene symbol
    B3GALNT1
    Gene description
    beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
    Locus tag
    CR201_G0007852
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Also known as
    B3GALT3
    Orthologs

    Genomic context

    See B3GALNT1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Susie_PABv2 (GCF_002880775.1) 3 NC_036906.1 (158467654..158489215, complement)
    102 previous assembly P_pygmaeus_2.0.2 (GCF_000001545.4) 3 NC_012594.1 (164391394..164413610, complement)

    Chromosome 3 - NC_036906.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA72 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene NMD3 ribosome export adaptor Neighboring gene elongation factor 1-gamma-like

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • DKFZp459D1516

    General protein information

    Preferred Names
    UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1
    Names
    UDP-N-acetylgalactosamine:globotriaosylceramide beta-1,3-N-acetylgalactosaminyltransferase
    b3Gal-T3
    beta-1,3-GalNAc-T1
    beta-1,3-GalTase 3
    beta-1,3-galactosyltransferase 3
    beta-3-Gx-T3
    beta3Gal-T3
    beta3GalT3
    galactosylgalactosylglucosylceramide beta-D-acetyl-galactosaminyltransferase
    globoside synthase
    NP_001127386.1
    XP_024099913.1
    XP_024099914.1
    XP_024099915.1
    XP_024099916.1
    XP_024099917.1
    XP_024099918.1
    XP_024099919.1
    XP_024099920.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001133914.1NP_001127386.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

      See identical proteins and their annotated locations for NP_001127386.1

      Status: PROVISIONAL

      Source sequence(s)
      CR858998
      UniProtKB/Swiss-Prot
      Q5RAL7
      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase

    RefSeqs of Annotated Genomes: Pongo abelii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Susie_PABv2 Primary Assembly

    Genomic

    1. NC_036906.1 Reference Susie_PABv2 Primary Assembly

      Range
      158467654..158489215 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024244150.1XP_024099918.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase
    2. XM_024244148.1XP_024099916.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase
    3. XM_024244152.1XP_024099920.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase
    4. XM_024244149.1XP_024099917.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase
    5. XM_024244146.1XP_024099914.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase
    6. XM_024244145.1XP_024099913.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase
    7. XM_024244147.1XP_024099915.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase
    8. XM_024244151.1XP_024099919.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

      Conserved Domains (1) summary
      pfam01762
      Location:92285
      Galactosyl_T; Galactosyltransferase
    Support Center