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    SVIL supervillin [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100173527, updated on 7-Oct-2018

    Summary

    Gene symbol
    SVIL
    Gene description
    supervillin
    Locus tag
    CR201_G0044686
    See related
    Ensembl:ENSPPYG00000002182
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs

    Genomic context

    See SVIL in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    103 current Susie_PABv2 (GCF_002880775.1) 10 NC_036913.1 (29956513..30156847, complement)
    102 previous assembly P_pygmaeus_2.0.2 (GCF_000001545.4) 10 NC_012601.1 (30606412..30718204, complement)

    Chromosome 10 - NC_036913.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103891606 Neighboring gene putative uncharacterized protein encoded by LINC00575 Neighboring gene uncharacterized LOC103891605 Neighboring gene small nucleolar RNA SNORD115 Neighboring gene U6 spliceosomal RNA Neighboring gene junctional cadherin 5 associated

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    Clone Names

    • DKFZp468F0819

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pongo abelii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Susie_PABv2 Primary Assembly

    Genomic

    1. NC_036913.1 Reference Susie_PABv2 Primary Assembly

      Range
      29956513..30156847 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009245214.2XP_009243489.2  supervillin isoform X8

      Conserved Domains (5) summary
      smart00153
      Location:17531788
      VHP; Villin headpiece domain
      cd11280
      Location:11371237
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:14531558
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:10161112
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:13201433
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    2. XM_009245211.2XP_009243486.2  supervillin isoform X4

      Conserved Domains (5) summary
      smart00153
      Location:21472182
      VHP; Villin headpiece domain
      cd11280
      Location:15311631
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:18471952
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:14101506
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:17141827
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    3. XM_009245213.2XP_009243488.2  supervillin isoform X3

      Conserved Domains (5) summary
      smart00153
      Location:22062241
      VHP; Villin headpiece domain
      cd11280
      Location:15901690
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:19062011
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:14691565
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:17731886
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    4. XM_024253316.1XP_024109084.1  supervillin isoform X1

      Conserved Domains (5) summary
      smart00153
      Location:22332268
      VHP; Villin headpiece domain
      cd11280
      Location:16171717
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:19332038
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:14961592
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:18001913
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    5. XM_009245212.2XP_009243487.2  supervillin isoform X2

      Conserved Domains (5) summary
      smart00153
      Location:22322267
      VHP; Villin headpiece domain
      cd11280
      Location:16161716
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:19322037
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:14951591
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:17991912
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    6. XM_024253320.1XP_024109088.1  supervillin isoform X6

      Conserved Domains (5) summary
      smart00153
      Location:19231958
      VHP; Villin headpiece domain
      cd11280
      Location:13071407
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:16231728
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:11861278
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:14901603
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    7. XM_024253321.1XP_024109089.1  supervillin isoform X7

      Conserved Domains (5) summary
      smart00153
      Location:18391874
      VHP; Villin headpiece domain
      cd11280
      Location:12231323
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:15391644
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:11021198
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:14061519
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    8. XM_024253317.1XP_024109085.1  supervillin isoform X4

      Conserved Domains (5) summary
      smart00153
      Location:21472182
      VHP; Villin headpiece domain
      cd11280
      Location:15311631
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:18471952
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:14101506
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:17141827
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    9. XM_024253319.1XP_024109087.1  supervillin isoform X5

      Conserved Domains (5) summary
      smart00153
      Location:21242159
      VHP; Villin headpiece domain
      cd11280
      Location:15081608
      gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
      cd11288
      Location:18241929
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11289
      Location:13871483
      gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:16911804
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
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