Format

Send to:

Choose Destination
    • Showing Current items.

    BABAM1 BRISC and BRCA1 A complex member 1 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100173294, updated on 7-Oct-2018

    Summary

    Gene symbol
    BABAM1
    Gene description
    BRISC and BRCA1 A complex member 1
    Locus tag
    CR201_G0037443
    See related
    Ensembl:ENSPPYG00000009705
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Also known as
    MERIT40; C19orf62
    Orthologs

    Genomic context

    See BABAM1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Susie_PABv2 (GCF_002880775.1) 19 NC_036922.1 (17446687..17458769)
    102 previous assembly P_pygmaeus_2.0.2 (GCF_000001545.4) 19 NC_012610.1 (17643419..17654946)

    Chromosome 19 - NC_036922.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 2 group F member 6 Neighboring gene USH1 protein network component harmonin binding protein 1 Neighboring gene ankyrin repeat and LEM domain containing 1 Neighboring gene abhydrolase domain containing 8

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Homologous recombination, organism-specific biosystem (from KEGG)
      Homologous recombination, organism-specific biosystemHomologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves...
    • Homologous recombination, conserved biosystem (from KEGG)
      Homologous recombination, conserved biosystemHomologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves...

    General gene information

    Markers

    Homology

    Clone Names

    • DKFZp468C208

    General protein information

    Preferred Names
    BRISC and BRCA1-A complex member 1
    Names
    BRCA1-A complex subunit MERIT40
    Uncharacterized protein C19orf62 homolog
    mediator of RAP80 interactions and targeting subunit of 40 kDa
    new component of the BRCA1-A complex

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001132843.1NP_001126315.1  BRISC and BRCA1-A complex member 1

      See identical proteins and their annotated locations for NP_001126315.1

      Status: PROVISIONAL

      Source sequence(s)
      CR860103
      UniProtKB/Swiss-Prot
      Q5R7L2
      Related
      ENSPPYP00000010875, ENSPPYT00000011299

    RefSeqs of Annotated Genomes: Pongo abelii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Susie_PABv2 Primary Assembly

    Genomic

    1. NC_036922.1 Reference Susie_PABv2 Primary Assembly

      Range
      17446687..17458769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024236339.1XP_024092107.1  BRISC and BRCA1-A complex member 1 isoform X2

    2. XM_024236336.1XP_024092104.1  BRISC and BRCA1-A complex member 1 isoform X1

    3. XM_024236334.1XP_024092102.1  BRISC and BRCA1-A complex member 1 isoform X1

    4. XM_024236337.1XP_024092105.1  BRISC and BRCA1-A complex member 1 isoform X1

    5. XM_024236335.1XP_024092103.1  BRISC and BRCA1-A complex member 1 isoform X1

    6. XM_024236338.1XP_024092106.1  BRISC and BRCA1-A complex member 1 isoform X1

    Support Center