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    LOC100166161 ephrin type-B receptor 1-B [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100166161, updated on 8-Apr-2017

    Summary

    Gene symbol
    LOC100166161
    Gene description
    ephrin type-B receptor 1-B
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
    Also known as
    EPHA7

    Genomic context

    See LOC100166161 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    102 current Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383918.1 (209694..343131)

    NW_003383918.1Genomic Context describing neighboring genes Neighboring gene protein disulfide-isomerase A6 Neighboring gene uncharacterized LOC100572661

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003383918.1 Unplaced Scaffold Reference Acyr_2.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    ephrin type-A receptor 4-B; ephrin type-B receptor 1-B
    Names
    EPH receptor A7

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Acyr_2.0 Primary Assembly

    Genomic

    1. NW_003383918.1 Reference Acyr_2.0 Primary Assembly

      Range
      209694..343131
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008186260.2XP_008184482.1  ephrin type-B receptor 1-B isoform X3

      Conserved Domains (7) summary
      cd09488
      Location:9881048
      SAM_EPH-R; SAM domain of EPH family of tyrosine kinase receptors
      smart00454
      Location:9841051
      SAM; Sterile alpha motif
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:688961
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:693957
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:618688
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    2. XM_003245444.3XP_003245492.1  ephrin type-B receptor 1-B isoform X1

      Conserved Domains (7) summary
      cd09488
      Location:9991059
      SAM_EPH-R; SAM domain of EPH family of tyrosine kinase receptors
      smart00454
      Location:9951062
      SAM; Sterile alpha motif
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:699972
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:704968
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:669699
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    3. XM_008186259.2XP_008184481.1  ephrin type-B receptor 1-B isoform X2

      Conserved Domains (7) summary
      cd09488
      Location:9941054
      SAM_EPH-R; SAM domain of EPH family of tyrosine kinase receptors
      smart00454
      Location:9901057
      SAM; Sterile alpha motif
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:699967
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:704963
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:669699
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    4. XM_008186261.2XP_008184483.1  ephrin type-B receptor 1-B isoform X4

      Conserved Domains (7) summary
      cd09488
      Location:9821042
      SAM_EPH-R; SAM domain of EPH family of tyrosine kinase receptors
      smart00454
      Location:9781045
      SAM; Sterile alpha motif
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:682955
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:687951
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:618682
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    5. XM_008186263.2XP_008184485.1  ephrin type-B receptor 1-B isoform X6

      Conserved Domains (7) summary
      cd09488
      Location:9771037
      SAM_EPH-R; SAM domain of EPH family of tyrosine kinase receptors
      smart00454
      Location:9731040
      SAM; Sterile alpha motif
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:682950
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:687946
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:618682
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    6. XM_008186264.2XP_008184486.1  ephrin type-B receptor 1-B isoform X7

      Conserved Domains (7) summary
      cd09488
      Location:9651025
      SAM_EPH-R; SAM domain of EPH family of tyrosine kinase receptors
      smart00454
      Location:9611028
      SAM; Sterile alpha motif
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:670938
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:675934
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:600670
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    7. XM_008186262.2XP_008184484.1  ephrin type-B receptor 1-B isoform X5

      Conserved Domains (7) summary
      cd09488
      Location:9811041
      SAM_EPH-R; SAM domain of EPH family of tyrosine kinase receptors
      smart00454
      Location:9771044
      SAM; Sterile alpha motif
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:681954
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:686950
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:651681
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    8. XM_003245443.3XP_003245491.1  ephrin type-B receptor 1-B isoform X8

      UniProtKB/TrEMBL
      X1WQ64
      Conserved Domains (7) summary
      cd09488
      Location:9591019
      SAM_EPH-R; SAM domain of EPH family of tyrosine kinase receptors
      smart00454
      Location:9551022
      SAM; Sterile alpha motif
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:664932
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:669928
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:600664
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    9. XM_016805569.1XP_016661058.1  ephrin type-B receptor 1-B isoform X9

    10. XM_003245445.3XP_003245493.1  ephrin type-A receptor 4-B isoform X10

      Conserved Domains (5) summary
      cd00063
      Location:358437
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05033
      Location:699972
      PTKc_EphR; Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases
      pfam01404
      Location:53228
      Ephrin_lbd; Ephrin receptor ligand binding domain
      pfam07714
      Location:704968
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:669699
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
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