Format

Send to:

Choose Destination
    • Showing Current items.

    tnfrsf1a TNF receptor superfamily member 1A [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100144930, updated on 20-Jun-2018

    Summary

    Symbol
    tnfrsf1aprovided by Xenbase
    Full Name
    TNF receptor superfamily member 1Aprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-996080
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    fpf; p55; tbp1; p55-r; tnf-r; tnfar; tnfr1; cd120a; tnfr55; tnfr60
    Orthologs

    Genomic context

    See tnfrsf1a in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (1880587..1910852)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668240.1 (6925739..6956004, complement)

    Chromosome 7 - NC_030683.1Genomic Context describing neighboring genes Neighboring gene sodium channel, non voltage gated 1 alpha subunit Neighboring gene sialidase-like Neighboring gene olfactory receptor 1L4-like Neighboring gene olfactory receptor 1030-like

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    tumor necrosis factor receptor superfamily member 1A

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126504.1NP_001119976.1  tumor necrosis factor receptor superfamily member 1A precursor

      See identical proteins and their annotated locations for NP_001119976.1

      Status: PROVISIONAL

      Source sequence(s)
      BC158220
      UniProtKB/TrEMBL
      B0BLZ4
      Conserved Domains (2) summary
      cd08313
      Location:328407
      Death_TNFR1; Death domain of Tumor Necrosis Factor Receptor 1
      cd10576
      Location:58187
      TNFRSF1A; Tumor necrosis factor receptor superfamily member 1A (TNFRSF1A), also known as TNFR1

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030683.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      1880587..1910852
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center