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    SERPINC1 serpin family C member 1 [ Sus scrofa (pig) ]

    Gene ID: 100125972, updated on 2-Oct-2018

    Summary

    Gene symbol
    SERPINC1
    Gene description
    serpin family C member 1
    See related
    Ensembl:ENSSSCG00000015493
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Also known as
    AT3
    Expression
    Biased expression in liver (RPKM 1883.4) and mixtures (RPKM 654.5) See more
    Orthologs

    Genomic context

    See SERPINC1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (116181988..116193100, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (127817120..127828237, complement)

    Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110255511 Neighboring gene zinc finger and BTB domain containing 37 Neighboring gene uncharacterized LOC110255512 Neighboring gene ring finger and CCCH-type domains 1 Neighboring gene 60S ribosomal protein L13 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General protein information

    Preferred Names
    antithrombin-III
    Names
    antithrombin III
    serpin peptidase inhibitor, clade C (antithrombin), member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001129958.1NP_001123430.1  antithrombin-III precursor

      See identical proteins and their annotated locations for NP_001123430.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ530373
      UniProtKB/TrEMBL
      Q19AZ5
      Related
      ENSSSCP00000016426.2, ENSSSCT00000016877.3
      Conserved Domains (1) summary
      cd02045
      Location:80459
      antithrombin-III_like; Antithrombin is a serine proteinase inhibitor (serpin) which controls the process of coagulation. It is the most important anticoagulant molecule in mammalian circulation systems, controlled by its interaction with the co-factor, heparin, which ...

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

      Range
      116181988..116193100 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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