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    gipc3 GIPC PDZ domain containing family member 3 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100125129, updated on 20-Jun-2018

    Summary

    Symbol
    gipc3provided by Xenbase
    Full Name
    GIPC PDZ domain containing family member 3provided by Xenbase
    Primary source
    Xenbase:XB-GENE-6046859
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See gipc3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (74638456..74660953, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668232.1 (136867212..136889709)

    Chromosome 1 - NC_030677.1Genomic Context describing neighboring genes Neighboring gene cactin, spliceosome C complex subunit Neighboring gene thromboxane A2 receptor Neighboring gene high mobility group 20B Neighboring gene myeloid-derived growth factor

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    PDZ domain-containing protein GIPC3

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001103032.1NP_001096502.1  PDZ domain-containing protein GIPC3

      See identical proteins and their annotated locations for NP_001096502.1

      Status: PROVISIONAL

      Source sequence(s)
      BC135287
      UniProtKB/TrEMBL
      A4QNB3
      Conserved Domains (1) summary
      cd00992
      Location:119198
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030677.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      74638456..74660953 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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