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    scn3a sodium channel, voltage gated, type III alpha subunit [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100125099, updated on 9-Oct-2019

    Summary

    Symbol
    scn3aprovided by Xenbase
    Full Name
    sodium channel, voltage gated, type III alpha subunitprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-5812330
    See related
    Ensembl:ENSXETG00000019147
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    nav1.3; na(v)1.3

    Genomic context

    See scn3a in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (65349039..65452345)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668244.1 (15367213..15470523, complement)

    Chromosome 9 - NC_030685.1Genomic Context describing neighboring genes Neighboring gene sodium channel, voltage gated, type II alpha subunit Neighboring gene sodium channel protein type 2 subunit alpha-like Neighboring gene solute carrier family 38 member 11 Neighboring gene cordon-bleu WH2 repeat protein like 1

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    sodium channel protein type 2 subunit alpha

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030685.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      65349039..65452345
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012971260.2XP_012826714.1  sodium channel protein type 2 subunit alpha

      Related
      ENSXETP00000052547.1, ENSXETT00000053975.1
      Conserved Domains (4) summary
      cd13433
      Location:14881540
      Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
      pfam00520
      Location:12391496
      Ion_trans; Ion transport protein
      pfam06512
      Location:10081216
      Na_trans_assoc; Sodium ion transport-associated
      pfam11933
      Location:512627
      Na_trans_cytopl; Cytoplasmic domain of voltage-gated Na+ ion channel
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