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    IRF5 interferon regulatory factor 5 [ Equus caballus (horse) ]

    Gene ID: 100071786, updated on 7-Oct-2019

    Summary

    Official Symbol
    IRF5provided by VGNC
    Official Full Name
    interferon regulatory factor 5provided by VGNC
    Primary source
    VGNC:VGNC:19135
    See related
    Ensembl:ENSECAG00000009902
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs

    Genomic context

    See IRF5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 4 NC_009147.3 (83913344..83924591)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 4 NC_009147.2 (83814843..83820741)

    Chromosome 4 - NC_009147.3Genomic Context describing neighboring genes Neighboring gene kielin cysteine rich BMP regulator Neighboring gene microRNA mir-9084 Neighboring gene uncharacterized LOC111773249 Neighboring gene transportin 3 Neighboring gene transfer RNA tyrosine (anticodon AUA)

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Toll-like receptor signaling pathway, organism-specific biosystem (from KEGG)
      Toll-like receptor signaling pathway, organism-specific biosystemSpecific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors id...
    • Toll-like receptor signaling pathway, conserved biosystem (from KEGG)
      Toll-like receptor signaling pathway, conserved biosystemSpecific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors id...

    General protein information

    Preferred Names
    interferon regulatory factor 5

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009147.3 Reference EquCab3.0 Primary Assembly

      Range
      83913344..83924591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023639652.1XP_023495420.1  interferon regulatory factor 5

      Related
      ENSECAP00000050069.1, ENSECAT00000068686.1
      Conserved Domains (2) summary
      pfam00605
      Location:16121
      IRF; Interferon regulatory factor transcription factor
      pfam10401
      Location:255438
      IRF-3; Interferon-regulatory factor 3
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