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    MAN2C1 mannosidase alpha class 2C member 1 [ Equus caballus (horse) ]

    Gene ID: 100061610, updated on 19-Jan-2019

    Summary

    Official Symbol
    MAN2C1provided by VGNC
    Official Full Name
    mannosidase alpha class 2C member 1provided by VGNC
    Primary source
    VGNC:VGNC:19912
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs

    Genomic context

    See MAN2C1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (119706767..119719318)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 1 NC_009144.2 (118570937..118583509)

    Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111775722 Neighboring gene protein tyrosine phosphatase non-receptor type 9 Neighboring gene uncharacterized LOC111775293 Neighboring gene SIN3 transcription regulator family member A Neighboring gene nei like DNA glycosylase 1 Neighboring gene COMM domain containing 4 Neighboring gene taste receptor cell protein 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009144.3 Reference EquCab3.0 Primary Assembly

      Range
      119706767..119719318
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005602902.3XP_005602959.1  alpha-mannosidase 2C1 isoform X6

      Conserved Domains (5) summary
      cd10813
      Location:254505
      GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
      smart00872
      Location:520598
      Alpha-mann_mid; Alpha mannosidase, middle domain
      COG0383
      Location:701054
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
      pfam02837
      Location:62150
      Glyco_hydro_2_N; Glycosyl hydrolases family 2, sugar binding domain
      pfam07748
      Location:6241050
      Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
    2. XM_023653260.1XP_023509028.1  alpha-mannosidase 2C1 isoform X3

      Conserved Domains (2) summary
      COG0383
      Location:701005
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
      cl25404
      Location:254473
      GH38-57_N_LamB_YdjC_SF; Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/YcsF family proteins, YdjC-family proteins, and similar proteins
    3. XM_023653250.1XP_023509018.1  alpha-mannosidase 2C1 isoform X2

      Conserved Domains (2) summary
      COG0383
      Location:701030
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
      cl25404
      Location:254498
      GH38-57_N_LamB_YdjC_SF; Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/YcsF family proteins, YdjC-family proteins, and similar proteins
    4. XM_023653267.1XP_023509035.1  alpha-mannosidase 2C1 isoform X4

      Conserved Domains (2) summary
      COG0383
      Location:701000
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
      cl25404
      Location:254468
      GH38-57_N_LamB_YdjC_SF; Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/YcsF family proteins, YdjC-family proteins, and similar proteins
    5. XM_001917552.5XP_001917587.2  alpha-mannosidase 2C1 isoform X1

      Conserved Domains (5) summary
      cd10813
      Location:254505
      GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
      smart00872
      Location:520598
      Alpha-mann_mid; Alpha mannosidase, middle domain
      COG0383
      Location:701037
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
      pfam02837
      Location:62150
      Glyco_hydro_2_N; Glycosyl hydrolases family 2, sugar binding domain
      pfam07748
      Location:6241033
      Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
    6. XM_023653270.1XP_023509038.1  alpha-mannosidase 2C1 isoform X5

      Conserved Domains (2) summary
      cd10813
      Location:111362
      GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
      COG0383
      Location:112894
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
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