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    MATN1 matrilin 1 [ Monodelphis domestica (gray short-tailed opossum) ]

    Gene ID: 100032825, updated on 14-Feb-2018

    Summary

    Gene symbol
    MATN1
    Gene description
    matrilin 1
    See related
    Ensembl:ENSMODG00000017050
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Monodelphis domestica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
    Orthologs

    Genomic context

    See MATN1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current MonDom5 (GCF_000002295.2) 4 NC_008804.1 (431579901..431613589)

    Chromosome 4 - NC_008804.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103099573 Neighboring gene syndecan 3 Neighboring gene lysosomal protein transmembrane 5 Neighboring gene protein FAM136A pseudogene Neighboring gene uncharacterized LOC103101014

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_008804.1 Chromosome 4 Reference MonDom5 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    cartilage matrix protein
    Names
    matrilin 1, cartilage matrix protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Monodelphis domestica Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MonDom5 Primary Assembly

    Genomic

    1. NC_008804.1 Reference MonDom5 Primary Assembly

      Range
      431579901..431613589
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007493000.2XP_007493062.1  cartilage matrix protein isoform X1

      Related
      ENSMODP00000021274.3, ENSMODT00000021648.3
      Conserved Domains (2) summary
      cd01475
      Location:39262
      vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
      cl00057
      Location:273496
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    2. XM_001381718.3XP_001381755.2  cartilage matrix protein isoform X2

      Conserved Domains (2) summary
      cd01475
      Location:38261
      vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
      cl00057
      Location:272495
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
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