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LOC4352868 glycine-rich RNA-binding protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4352868, updated on 3-Jun-2019

Summary

Gene symbol
LOC4352868
Gene description
glycine-rich RNA-binding protein 2
Locus tag
OSNPB_120632000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OSGRP2; OsGRP1
Expression
Ubiquitous expression in leaves after flowering (RPKM 3629.1), roots before flowering (RPKM 3176.3) and 6 other tissues See more

Genomic context

See LOC4352868 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (27060213..27061164)

Chromosome 12 - NC_029267.1Genomic Context describing neighboring genes Neighboring gene pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene ADP-ribosylation factor-like protein 2 Neighboring gene uncharacterized LOC9268585

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029267.1 Chromosome 12 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
glycine-rich RNA-binding protein 2
Names
Glycin-rich RNA binding protein
Os12g0632000
glycine-rich RNA binding protein
glycine-rich protein

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029267.1 Reference IRGSP-1.0 Primary Assembly

    Range
    27060213..27061164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015764532.1XP_015620018.1  glycine-rich RNA-binding protein 2

    UniProtKB/TrEMBL
    Q2QLR2
    Conserved Domains (1) summary
    cl17169
    Location:1185
    RRM_SF; RNA recognition motif (RRM) superfamily
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