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LOC4341266 ras-related protein RIC2-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4341266, updated on 3-Jun-2019

Summary

Gene symbol
LOC4341266
Gene description
ras-related protein RIC2-like
Locus tag
OSNPB_060551400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
RIC2; SS230
Expression
Ubiquitous expression in mature seeds (RPKM 87.1), flower buds (RPKM 66.0) and 6 other tissues See more

Genomic context

See LOC4341266 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (20896081..20901758, complement)

Chromosome 6 - NC_029261.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4341263 Neighboring gene uncharacterized LOC107281172 Neighboring gene uncharacterized LOC4341267 Neighboring gene transfer RNA glutamine (anticodon CUG)

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029261.1 Chromosome 6 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
ras-related protein RIC2
Names
GTP-binding protein
LOC_Os06g35814
Os06g0551400
P0659D09.45

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029261.1 Reference IRGSP-1.0 Primary Assembly

    Range
    20896081..20901758 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015788532.2XP_015644018.1  ras-related protein RIC2

    UniProtKB/Swiss-Prot
    P40393
    Conserved Domains (2) summary
    PLN03110
    Location:5216
    PLN03110; Rab GTPase; Provisional
    cd01868
    Location:12176
    Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25
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