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LOC4340518 5'-adenylylsulfate reductase-like 2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4340518, updated on 9-Aug-2018

Summary

Gene symbol
LOC4340518
Gene description
5'-adenylylsulfate reductase-like 2
Locus tag
OSNPB_060220800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
APRL2; OsAPRL2; OsJ_20625; P0516A04.7
Expression
Ubiquitous expression in leaves after flowering (RPKM 30.4), roots after flowering (RPKM 24.2) and 6 other tissues See more

Genomic context

See LOC4340518 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (6222557..6224695)

Chromosome 6 - NC_029261.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase 85A2 Neighboring gene probable RNA-binding protein ARP1 Neighboring gene uncharacterized LOC112939256 Neighboring gene uncharacterized LOC107281460

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029261.1 Chromosome 6 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

General protein information

Preferred Names
5'-adenylylsulfate reductase-like 2
Names
APR-like 2
Adenosine 5'-phosphosulfate reductase-like 2
LOC_Os06g11740
Os06g0220800
P0436F11.46
disulfide isomerase-like protein

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029261.1 Reference IRGSP-1.0 Primary Assembly

    Range
    6222557..6224695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015788491.2XP_015643977.1  5'-adenylylsulfate reductase-like 2

    UniProtKB/Swiss-Prot
    Q67VZ8
    Conserved Domains (1) summary
    cd02999
    Location:55154
    PDI_a_ERp44_like; PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; ...
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