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LOC4331225 uncharacterized LOC4331225 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4331225, updated on 9-Aug-2018

Summary

Gene symbol
LOC4331225
Gene description
uncharacterized LOC4331225
Locus tag
OSNPB_020827600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Expression
Broad expression in leaves before flowering (RPKM 29.2), flower buds (RPKM 11.8) and 5 other tissues See more

Genomic context

See LOC4331225 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (35567732..35570451, complement)

Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4331223 Neighboring gene uncharacterized LOC9267532 Neighboring gene pentatricopeptide repeat-containing protein At5g38730 Neighboring gene signal peptidase complex catalytic subunit SEC11C Neighboring gene uncharacterized LOC4331227

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
uncharacterized protein LOC4331225
Names
Os02g0827600
P0452F04.30

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

    Range
    35567732..35570451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015771130.2XP_015626616.1  uncharacterized protein LOC4331225

    UniProtKB/TrEMBL
    Q0DW79
    Conserved Domains (1) summary
    pfam12049
    Location:127264
    DUF3531; Protein of unknown function (DUF3531)
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