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LOC4329668 protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4329668, updated on 3-Jun-2019

Summary

Gene symbol
LOC4329668
Gene description
protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1
Locus tag
OSNPB_020556800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1008_F08.20
Expression
Broad expression in leaves before flowering (RPKM 47.4), roots after flowering (RPKM 43.7) and 6 other tissues See more

Genomic context

See LOC4329668 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (21060003..21061650, complement)

Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene ran-binding protein M homolog Neighboring gene uncharacterized LOC4329667 Neighboring gene uncharacterized LOC107280142 Neighboring gene DDT domain-containing protein DDB_G0282237 Neighboring gene tubulin-folding cofactor C

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1
Names
Os02g0556800
proline-rich family protein-like

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

    Range
    21060003..21061650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015770395.2XP_015625881.1  protein MAINTENANCE OF PSII UNDER HIGH LIGHT 1

    UniProtKB/TrEMBL
    Q6ZI79
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