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LOC4328392 40S ribosomal protein S14 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4328392, updated on 9-Aug-2018

Summary

Gene symbol
LOC4328392
Gene description
40S ribosomal protein S14
Locus tag
OSNPB_020162500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ9003_G05.34
Expression
Ubiquitous expression in mature seeds (RPKM 271.1), flower buds (RPKM 263.2) and 6 other tissues See more

Genomic context

See LOC4328392 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (3358927..3360783, complement)

Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene early nodulin-like protein 1 Neighboring gene early nodulin-like protein 1 Neighboring gene uncharacterized LOC4328393 Neighboring gene BEACH domain-containing protein B Neighboring gene uncharacterized LOC4328397

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Homology

  • Homologs of the LOC4328392 gene: The LOC4328392 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

General protein information

Preferred Names
40S ribosomal protein S14
Names
Os02g0162500
putative ribosomal protein S14

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

    Range
    3358927..3360783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015772193.1XP_015627679.1  40S ribosomal protein S14

    UniProtKB/TrEMBL
    Q6H7T1
    Conserved Domains (1) summary
    PTZ00129
    Location:1139
    PTZ00129; 40S ribosomal protein S14; Provisional
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