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LOC4325743 germin-like protein 1-3 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4325743, updated on 4-Oct-2018

Summary

Gene symbol
LOC4325743
Gene description
germin-like protein 1-3
Locus tag
OSNPB_010952000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
GER8; OsGER8; OsJ_004676
Expression
Low expression observed in reference dataset See more

Genomic context

See LOC4325743 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (41914667..41915926)

Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 94A2 Neighboring gene mitochondrial fission 1 protein A Neighboring gene germin-like protein 1-4 Neighboring gene F-box protein At3g54460

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
germin-like protein 1-3
Names
LOC_Os01g72290
Os01g0952000
P0431G06.1-1
P0431G06.1-2
germin-like protein 8
putative Rhicadhesin receptor

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

    Range
    41914667..41915926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015788572.2XP_015644058.1  germin-like protein 1-3

    UniProtKB/Swiss-Prot
    Q942A8
    Conserved Domains (1) summary
    pfam00190
    Location:65212
    Cupin_1; Cupin
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