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LOC4327257 50S ribosomal protein L27, chloroplastic-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4327257, updated on 4-Oct-2018

Summary

Gene symbol
LOC4327257
Gene description
50S ribosomal protein L27, chloroplastic-like
Locus tag
OSNPB_010924000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
CL27; RPL27
Expression
Broad expression in leaves before flowering (RPKM 176.5), flowers (RPKM 80.6) and 4 other tissues See more

Genomic context

See LOC4327257 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (40453834..40455610)

Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4327255 Neighboring gene F-box only protein 6 Neighboring gene uncharacterized LOC4327259 Neighboring gene uncharacterized WD repeat-containing protein C17D11.16

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General protein information

Preferred Names
50S ribosomal protein L27, chloroplastic
Names
B1033B05.2-1
LOC_Os01g69950
Os01g0924000
Os01g0924100
P0592G05.26-1
ribosomal protein L27

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

    Range
    40453834..40455610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015769781.1XP_015625267.1  50S ribosomal protein L27, chloroplastic

    UniProtKB/Swiss-Prot
    O65037
    Conserved Domains (1) summary
    PRK05435
    Location:60141
    rpmA; 50S ribosomal protein L27; Validated
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