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LOC4327364 F-box protein At4g18380 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4327364, updated on 3-Jun-2019

Summary

Gene symbol
LOC4327364
Gene description
F-box protein At4g18380
Locus tag
OSNPB_010812200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0432B10.4
Expression
Broad expression in roots before flowering (RPKM 61.9), flowers (RPKM 9.7) and 6 other tissues See more

Genomic context

See LOC4327364 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (34531760..34533737)

Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene dentin sialophosphoprotein Neighboring gene NDR1/HIN1-like protein 13 Neighboring gene uncharacterized LOC9271886 Neighboring gene 60S ribosomal protein L30

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

General protein information

Preferred Names
F-box protein At4g18380
Names
F-box protein family-like
Os01g0812200
P0425G02.24

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

    Range
    34531760..34533737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015766980.2XP_015622466.1  F-box protein At4g18380

    UniProtKB/TrEMBL
    Q5VQR7
    Conserved Domains (1) summary
    pfam12937
    Location:1853
    F-box-like; F-box-like
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