Format

Send to:

Choose Destination

LOC4324197 U-box domain-containing protein 35 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4324197, updated on 2-Mar-2021

Summary

Gene symbol
LOC4324197
Gene description
U-box domain-containing protein 35
Locus tag
OSNPB_010581400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Expression
Biased expression in flower buds (RPKM 199.5) and flowers (RPKM 71.4) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC4324197 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (22538737..22542155)

Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4324195 Neighboring gene lycopene epsilon cyclase, chloroplastic Neighboring gene uncharacterized LOC9270742 Neighboring gene uncharacterized LOC9272369

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

General protein information

Preferred Names
U-box domain-containing protein 35
Names
B1097D05.17
Os01g0581400
serine threonine kinase 1-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

    Range
    22538737..22542155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015766711.1XP_015622197.1  U-box domain-containing protein 35

    UniProtKB/TrEMBL
    Q5ZB74
    Conserved Domains (2) summary
    cd01989
    Location:28170
    STK_N; The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein ...
    cl21453
    Location:464724
    PKc_like; Protein Kinases, catalytic domain
Support Center