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XRCC2 homolog of X-ray repair cross complementing 2 (XRCC2) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836573, updated on 7-Sep-2023

Summary

Gene symbol
XRCC2
Gene description
homolog of X-ray repair cross complementing 2 (XRCC2)
Primary source
Araport:AT5G64520
Locus tag
AT5G64520
See related
TAIR:AT5G64520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATXRCC2; homolog of X-ray repair cross complementing 2; homolog of X-ray repair cross complementing 2 (XRCC2); MUB3.4; MUB3_4
Summary
Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
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Genomic context

See XRCC2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Sequence:
Chromosome: 5; NC_003076.8 (25787969..25791197)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tunicamycin induced protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene xylem NAC domain 1

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001345633.1
NM_001345634.1
NM_001345635.1
NM_001345637.1
NM_001345638.1
NM_001345639.1
NM_001345640.1
NM_001345641.1
NM_125848.3
NM_180937.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus ISM
Inferred from Sequence Model
more info
 
located_in replication fork IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
homolog of X-ray repair cross complementing 2 (XRCC2)
NP_001318876.1
  • homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
NP_201257.2
  • homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 215 Blast hits to 213 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 37; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
NP_851268.1
  • homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 216 Blast hits to 214 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 49; Plants - 37; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25787969..25791197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345636.1NP_001330643.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBH3, A0A5S9YGX0
    Conserved Domains (1) summary
    cd19490
    Location:43305
    XRCC2; XRCC2 recombinase
  2. NM_180937.2NP_851268.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851268.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q682D3, Q8GVF2, Q9FLG6
    UniProtKB/TrEMBL
    A0A178UIJ5, A0A5S9YGX0
    Conserved Domains (1) summary
    cd19490
    Location:43299
    XRCC2; XRCC2 recombinase
  3. NM_001345637.1NP_001330642.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBF2, A0A5S9YGX0, A0A7G2FJR3
    Conserved Domains (1) summary
    cd19490
    Location:43299
    XRCC2; XRCC2 recombinase
  4. NM_125848.3NP_201257.2  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201257.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UKI8, A0A5S9YGX0, F4KDQ6
    Conserved Domains (1) summary
    cd19490
    Location:43299
    XRCC2; XRCC2 recombinase
  5. NM_001345638.1NP_001330647.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJL6, A0A1P8BBG3, A0A384LLW8, A0A5S9YGX0
  6. NM_001345639.1NP_001330646.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBI8
  7. NM_001345640.1NP_001330649.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBG6
  8. NM_001345641.1NP_001330644.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBF9, A0A5S9YGX0, A0A7G2FKH2
    Conserved Domains (1) summary
    cd19490
    Location:43305
    XRCC2; XRCC2 recombinase
  9. NM_001345633.1NP_001330648.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBG4, A0A5S9YGX0
  10. NM_001345635.1NP_001318876.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2H1ZE99, A0A5S9YGX0
    Conserved Domains (1) summary
    cd19490
    Location:43305
    XRCC2; XRCC2 recombinase
  11. NM_001345634.1NP_001330645.1  homolog of X-ray repair cross complementing 2 (XRCC2) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBF0
    Conserved Domains (1) summary
    cd19490
    Location:43299
    XRCC2; XRCC2 recombinase