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AT5G52180 transmembrane protein 161AB protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835294, updated on 27-Sep-2019

Summary

Gene symbol
AT5G52180
Gene description
transmembrane protein 161AB protein
Primary source
Araport:AT5G52180
Locus tag
AT5G52180
Gene type
protein coding
RNA name
transmembrane protein 161AB protein
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17P19.8; F17P19_8

Genomic context

See AT5G52180 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (21200040..21201610, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin ligase BIG BROTHER-like protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene homeodomain GLABROUS 7 Neighboring gene Sugar isomerase (SIS) family protein Neighboring gene phosphoprotein phosphatase inhibitor

Pathways from PubChem

General protein information

Preferred Names
transmembrane protein 161AB protein
NP_200031.1
  • LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 161AB, predicted (InterPro:IPR019395); Has 82 Blast hits to 82 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21200040..21201610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124597.5NP_200031.1  transmembrane protein 161AB protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200031.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9LTK2
    Conserved Domains (1) summary
    pfam10268
    Location:220452
    Tmemb_161AB; Predicted transmembrane protein 161AB
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