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Glucose-methanol-choline (GMC) oxidoreductase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835268, updated on 18-Sep-2024
Official Full Name
Glucose-methanol-choline (GMC) oxidoreductase family protein
Primary source
TAIR:AT5G51930
Locus tag
AT5G51930
See related
Araport:AT5G51930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MSG15.1; MSG15_1
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Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (21101116..21103818)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene TCP family transcription factor Neighboring gene uncharacterized protein Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene RNA polymerase Rpb6 Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene complex 1 protein, LYR family protein

Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on CH-OH group of donors IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
Preferred Names
Glucose-methanol-choline (GMC) oxidoreductase family protein
NP_200006.1
  • Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT3G56060.1); Has 11026 Blast hits to 10629 proteins in 1097 species: Archae - 4; Bacteria - 3996; Metazoa - 809; Fungi - 1552; Plants - 300; Viruses - 18; Other Eukaryotes - 4347 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21101116..21103818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001344968.1 → NP_001330130.1  Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9V5, A0A654GAB1

  2. NM_124572.1 → NP_200006.1  Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200006.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KEQ5, Q9FJ99
    Conserved Domains (3) summary
    COG2303
    Location:70 → 582
    BetA; Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]
    pfam05199
    Location:437 → 581
    GMC_oxred_C; GMC oxidoreductase
    cl21454
    Location:73 → 317
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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