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Tetratricopeptide repeat (TPR)-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834200, updated on 18-Sep-2024

Summary

Official Full Name
Tetratricopeptide repeat (TPR)-like superfamily protein
Primary source
TAIR:AT5G41950
Locus tag
AT5G41950
See related
Araport:AT5G41950
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MJC20.5; MJC20_5
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Genomic context

Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (16785680..16789676)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene GRAS family transcription factor Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene zinc finger matrin-type protein Neighboring gene Metal-dependent protein hydrolase Neighboring gene nuclease Neighboring gene with no lysine (K) kinase 8

General protein information

Preferred Names
Tetratricopeptide repeat (TPR)-like superfamily protein
NP_199010.1
  • Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein import into mitochondrial outer membrane; LOCATED IN: mitochondrial outer membrane translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16785680..16789676
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123560.4NP_199010.1  Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199010.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FHY8
    UniProtKB/TrEMBL
    A0A178U7S6, A0A654G7B0
    Conserved Domains (4) summary
    PRK02603
    Location:213322
    PRK02603; photosystem I assembly protein Ycf3; Provisional
    sd00006
    Location:223265
    TPR; TPR repeat [structural motif]
    pfam06552
    Location:297367
    TOM20_plant; Plant specific mitochondrial import receptor subunit TOM20
    NF033909
    Location:4139
    opacity_OapA; opacity-associated protein OapA