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AGP24 arabinogalactan protein 24 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834073, updated on 27-Sep-2019

Summary

Gene symbol
AGP24
Gene description
arabinogalactan protein 24
Primary source
Araport:AT5G40730
Locus tag
AT5G40730
Gene type
protein coding
RNA name
arabinogalactan protein 24
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 24; arabinogalactan protein 24; ATAGP24; MNF13.250; MNF13_250
Summary
Encodes an arabinogalactan-protein (AGP24).

Genomic context

See AGP24 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (16301072..16301748)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene zinc finger (C2H2 type) family protein Neighboring gene C3H4 type zinc finger protein (DUF23) Neighboring gene HAUS augmin-like complex subunit Neighboring gene FBD / Leucine Rich Repeat domains containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_123438.3

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
anchored component of membrane TAS
Traceable Author Statement
more info
PubMed 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
arabinogalactan protein 24
NP_198889.1
  • arabinogalactan protein 24 (AGP24); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16301072..16301748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123438.3NP_198889.1  arabinogalactan protein 24 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198889.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q5PP12
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