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NEP-interacting protein, putative (DUF239) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833730, updated on 18-Sep-2024
Official Full Name
NEP-interacting protein, putative (DUF239)
Primary source
TAIR:AT5G37520
Locus tag
AT5G37520
See related
Araport:AT5G37520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MPA22.6; MPA22_6
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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (14902670..14904211)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene gated outwardly-rectifying K+ channel Neighboring gene NADH-ubiquinone dehydrogenase Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Eukaryotic aspartyl protease family protein

Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
Preferred Names
NEP-interacting protein, putative (DUF239)
NP_198568.1
  • Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT2G24950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    14902670..14904211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123111.1 → NP_198568.1  NEP-interacting protein, putative (DUF239) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198568.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y9B9, A0A654G656, F4K779
    Conserved Domains (1) summary
    pfam03080
    Location:3 → 196
    Neprosin
Nucleotide Protein
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