Format

Send to:

Choose Destination

TUA6 Tubulin/FtsZ family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827154, updated on 10-Oct-2019

Summary

Gene symbol
TUA6
Gene description
Tubulin/FtsZ family protein
Primary source
Araport:AT4G14960
Locus tag
AT4G14960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
Tubulin alpha-6
Summary
Encodes an alpha-tubulin isoform required for right handed helical growth.

Genomic context

See TUA6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (8548417..8550495, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Survival protein SurE-like phosphatase/nucleotidase Neighboring gene amine oxidase 1 Neighboring gene SNARE associated Golgi protein family Neighboring gene membrane-associated progesterone binding protein 4 Neighboring gene fanconi anemia group D2 protein

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the TUA6 gene: The TUA6 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, rice, and frog.
  • Orthologs
NM_117582.4
NM_179057.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
GTPase activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural constituent of cytoskeleton ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
cellular response to gravity IMP
Inferred from Mutant Phenotype
more info
PubMed 
microtubule cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cell wall IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm ISM
Inferred from Sequence Model
more info
 
cytosol HDA PubMed 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
microtubule IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus ISM
Inferred from Sequence Model
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
plasmodesma IDA
Inferred from Direct Assay
more info
PubMed 
tubulin complex IDA
Inferred from Direct Assay
more info
PubMed 
vacuole IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Tubulin/FtsZ family protein
NP_193232.1
  • TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink).
NP_849388.1
  • TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22344 Blast hits to 22275 proteins in 4636 species: Archae - 4; Bacteria - 22; Metazoa - 4264; Fungi - 13337; Plants - 1462; Viruses - 0; Other Eukaryotes - 3255 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8548417..8550495 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117582.4NP_193232.1  Tubulin/FtsZ family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193232.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P29511
    UniProtKB/TrEMBL
    A0A178UXP7
    Conserved Domains (1) summary
    PLN00221
    Location:1450
    PLN00221; tubulin alpha chain; Provisional
  2. NM_179057.1NP_849388.1  Tubulin/FtsZ family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849388.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B9DFF8
    Conserved Domains (2) summary
    PLN00221
    Location:1426
    PLN00221; tubulin alpha chain; Provisional
    cd02186
    Location:2386
    alpha_tubulin; The alpha-tubulin family
Support Center