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SEC8 subunit of exocyst complex 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820201, updated on 15-Oct-2023

Summary

Gene symbol
SEC8
Gene description
subunit of exocyst complex 8
Primary source
Araport:AT3G10380
Locus tag
AT3G10380
See related
TAIR:AT3G10380
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATSEC8; subunit of exocyst complex 8; SUBUNIT OF EXOCYST COMPLEX 8
Summary
Subunit of the Putative Arabidopsis Exocyst Complex
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Genomic context

See SEC8 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
27
Sequence:
Chromosome: 3; NC_003074.8 (3219507..3229034, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene pumilio 4 Neighboring gene FAD-dependent oxidoreductase family protein Neighboring gene protein FLOWERING locus D-like protein Neighboring gene RNA recognition motif and CCHC-type zinc finger domains containing protein Neighboring gene vacuolar acid trehalase

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
subunit of exocyst complex 8
NP_566372.1
  • subunit of exocyst complex 8 (SEC8); INVOLVED IN: pollen germination, mucilage biosynthetic process involved in seed coat development, pollen tube growth; LOCATED IN: cytosol, plasma membrane, exocyst; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec8 exocyst complex component specific domain (InterPro:IPR007191); Has 454 Blast hits to 346 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 133; Plants - 50; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3219507..3229034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111873.4NP_566372.1  subunit of exocyst complex 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566372.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q541W5, Q93YU5, Q9SS49
    UniProtKB/TrEMBL
    A0A178VA38, A0A5S9XB15, A0A654F5S7
    Conserved Domains (1) summary
    pfam04048
    Location:15150
    Sec8_exocyst; Sec8 exocyst complex component specific domain
  2. NM_001337871.1NP_001327644.1  subunit of exocyst complex 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LSY6, A0A654F5S7