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CYS2 PHYTOCYSTATIN 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817757, updated on 19-Aug-2022

Summary

Gene symbol
CYS2
Gene description
PHYTOCYSTATIN 2
Primary source
Araport:AT2G31980
Locus tag
AT2G31980
Gene type
protein coding
RNA name
PHYTOCYSTATIN 2
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtCYS2; F22D22.27; F22D22_27; PHYTOCYSTATIN 2
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Genomic context

See CYS2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (13609093..13609955, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene low-molecular-weight cysteine-rich 75 Neighboring gene glucan synthase-like 3 Neighboring gene DNA repair-recombination protein (RAD50) Neighboring gene hypothetical protein Neighboring gene Exostosin family protein

General gene information

NM_128758.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
PHYTOCYSTATIN 2
NP_180758.1
  • PHYTOCYSTATIN 2 (CYS2); FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved site (InterPro:IPR018073), Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: cystatin B (TAIR:AT3G12490.2); Has 619 Blast hits to 613 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 610; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13609093..13609955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128758.4NP_180758.1  PHYTOCYSTATIN 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180758.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L5T9, Q9SL01
    UniProtKB/TrEMBL
    A0A178VSQ8, A0A5S9X324
    Conserved Domains (1) summary
    cl09238
    Location:47142
    CY; Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.