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RCY1 arginine-rich cyclin 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817183, updated on 28-Aug-2022

Summary

Gene symbol
RCY1
Gene description
arginine-rich cyclin 1
Primary source
Araport:AT2G26430
Locus tag
AT2G26430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
arginine-rich cyclin 1; ARGININE-RICH CYCLIN 1; ATRCY1; modifier of snc1 12; MOS12; T9J22.10; T9J22_10
Summary
Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.
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Genomic context

See RCY1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (11243128..11246058, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene IQ-domain 4 Neighboring gene 1-phosphatidylinositol-4-phosphate 5-kinase 3 Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001084493.1
NM_001084494.1
NM_001336070.1
NM_128200.5

General protein information

Preferred Names
arginine-rich cyclin 1
NP_001077962.1
  • arginine-rich cyclin 1 (RCY1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to salt stress, regulation of cell cycle, regulation of transcription; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 13929 Blast hits to 7818 proteins in 361 species: Archae - 16; Bacteria - 504; Metazoa - 7801; Fungi - 1963; Plants - 1370; Viruses - 16; Other Eukaryotes - 2259 (source: NCBI BLink).
NP_001077963.1
  • arginine-rich cyclin 1 (RCY1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to salt stress, regulation of cell cycle, regulation of transcription; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 13929 Blast hits to 7818 proteins in 361 species: Archae - 16; Bacteria - 504; Metazoa - 7801; Fungi - 1963; Plants - 1370; Viruses - 16; Other Eukaryotes - 2259 (source: NCBI BLink).
NP_565622.1
  • arginine-rich cyclin 1 (RCY1); CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 14137 Blast hits to 8002 proteins in 370 species: Archae - 18; Bacteria - 504; Metazoa - 7867; Fungi - 2024; Plants - 1419; Viruses - 16; Other Eukaryotes - 2289 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11243128..11246058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128200.5NP_565622.1  arginine-rich cyclin 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565622.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RWV3, Q94L33
    UniProtKB/TrEMBL
    A0A5S9X1D9
    Conserved Domains (3) summary
    TIGR01622
    Location:336414
    SF-CC1; splicing factor, CC1-like family
    cd20591
    Location:21148
    CYCLIN_AcCycL_rpt1; first cyclin box found in Arabidopsis thaliana L-type cyclins (CycL) and similar proteins
    cd20594
    Location:150250
    CYCLIN_AcCycL_rpt2; second cyclin box found in Arabidopsis thaliana L-type cyclins (CycL) and similar proteins
  2. NM_001084493.1NP_001077962.1  arginine-rich cyclin 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077962.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RWV3
    Conserved Domains (2) summary
    cd00043
    Location:187
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
    pfam12871
    Location:281361
    PRP38_assoc; Pre-mRNA-splicing factor 38-associated hydrophilic C-term
  3. NM_001336070.1NP_001324176.1  arginine-rich cyclin 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZE0
  4. NM_001084494.1NP_001077963.1  arginine-rich cyclin 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077963.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RWV3
    Conserved Domains (2) summary
    cd00043
    Location:187
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
    pfam12871
    Location:281361
    PRP38_assoc; Pre-mRNA-splicing factor 38-associated hydrophilic C-term