U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AGL44 AGAMOUS-like 44 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 815907, updated on 19-Feb-2025
Official Symbol
AGL44
Official Full Name
AGAMOUS-like 44
Primary source
TAIR:AT2G14210
Locus tag
AT2G14210
See related
Araport:AT2G14210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AGAMOUS-like 44; ANR1; ARABIDOPSIS NITRATE REGULATED 1; F15N24.5; F15N24_5
Summary
MADS box gene, transcription factor
NEW
Try the new Gene table
Try the new Transcript table
See AGL44 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Sequence:
Chromosome: 2; NC_003071.7 (6018558..6023863)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Overexpressing the ANR1 MADS-box gene in transgenic plants provides new insights into its role in the nitrate regulation of root development. Gan Y, et al. Plant Cell Physiol, 2012 Jun. PMID 22523192
  2. Nitrogen regulation of root branching. Walch-Liu P, et al. Ann Bot, 2006 May. PMID 16339770, Free PMC Article
  3. Nitrate and glutamate sensing by plant roots. Filleur S, et al. Biochem Soc Trans, 2005 Feb. PMID 15667327
  4. Regulation of Arabidopsis root development by nitrate availability. Zhang H, et al. J Exp Bot, 2000 Jan. PMID 10938795
  5. An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture. Zhang H, et al. Science, 1998 Jan 16. PMID 9430595

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ANR1 overexpression accelerates early seedling development.
    Title: Overexpressing the ANR1 MADS-box gene in transgenic plants provides new insights into its role in the nitrate regulation of root development.
  2. ANR1 expression in roots of hydroponically grown Arabidopsis plants was specifically regulated by changes in the N supply, being induced by N deprivation and rapidly repressed by N re-supply.
    Title: Nutritional regulation of ANR1 and other root-expressed MADS-box genes in Arabidopsis thaliana.
  3. There is evidence for a nitrate-dependent component of the ANR1 signalling pathway.
    Title: Nitrogen regulation of root branching.
Submit: New GeneRIF Correction
Products Interactant Other Gene Complex Source Pubs Description
NM_126990.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to nitrate IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within lateral root development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in lateral root development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to nitrate IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to nutrient IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
Preferred Names
AGAMOUS-like 44
NP_179033.1
  • AGAMOUS-like 44 (AGL44); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to nutrient, lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7244 Blast hits to 7231 proteins in 902 species: Archae - 0; Bacteria - 10; Metazoa - 640; Fungi - 309; Plants - 6146; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink).

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    6018558..6023863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335416.1 → NP_001324071.1  AGAMOUS-like 44 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYX0, A0A654EST6

  2. NM_126990.3 → NP_179033.1  AGAMOUS-like 44 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179033.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49351, Q9SI38
    UniProtKB/TrEMBL
    A0A654EST6
    Conserved Domains (2) summary
    cd00265
    Location:2 → 79
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam01486
    Location:82 → 172
    K-box; K-box region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SI38.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools