U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AT1G75980 Single hybrid motif superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843930, updated on 26-May-2022

Summary

Gene symbol
AT1G75980
Gene description
Single hybrid motif superfamily protein
Primary source
Araport:AT1G75980
Locus tag
AT1G75980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T4O12.20; T4O12_20
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See AT1G75980 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (28522554..28524418, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AMP-dependent synthetase and ligase family protein Neighboring gene tRNA-Glu Neighboring gene PAM domain (PCI/PINT associated module) protein Neighboring gene tRNA-Asp Neighboring gene Alba DNA/RNA-binding protein

General gene information

Homology

NM_001334703.1
NM_106247.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
Single hybrid motif superfamily protein
NP_177725.1
  • Single hybrid motif superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glycine catabolic process; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930); Has 205 Blast hits to 205 proteins in 102 species: Archae - 6; Bacteria - 8; Metazoa - 118; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28522554..28524418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106247.4NP_177725.1  Single hybrid motif superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177725.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W5D9, A0JQ11
    Conserved Domains (1) summary
    cl11404
    Location:89220
    Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...
  2. NM_001334703.1NP_001322966.1  Single hybrid motif superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AVM1