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    acot9.1 acyl-CoA thioesterase 9, tandem duplicate 1 [ Danio rerio (zebrafish) ]

    Gene ID: 798073, updated on 14-Feb-2019

    Summary

    Official Symbol
    acot9.1provided by ZNC
    Official Full Name
    acyl-CoA thioesterase 9, tandem duplicate 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040724-139
    See related
    Ensembl:ENSDARG00000058352
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    acot9; zgc:110305; si:rp71-1f1.1

    Genomic context

    See acot9.1 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (21959991..21973501, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (21814817..21828322, complement)
    103 previous assembly Zv9 (GCF_000002035.4) 24 NC_007135.5 (22567939..22585931, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 10b Neighboring gene acyl-CoA thioesterase 9, tandem duplicate 2 Neighboring gene spermidine/spermine N1-acetyltransferase 1b Neighboring gene apolipoprotein O, b Neighboring gene si:rp71-1f1.4

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    • Homologs of the acot9.1 gene: The acot9.1 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, fruit fly, mosquito, C.elegans, K.lactis, E.gossypii, A.thaliana, and frog.
    • Orthologs

    Clone Names

    • MGC110305

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    acyl-CoA hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    acyl-CoA metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    acyl-CoA thioesterase 9, tandem duplicate 1
    Names
    acyl-CoA thioesterase 9.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001020744.1NP_001018580.1  acyl-CoA thioesterase 9, tandem duplicate 1

      See identical proteins and their annotated locations for NP_001018580.1

      Status: PROVISIONAL

      Source sequence(s)
      BC095220
      UniProtKB/TrEMBL
      Q503Q9
      Related
      ENSDARP00000075647.3, ENSDART00000081204.5
      Conserved Domains (1) summary
      cd03442
      Location:281401
      BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      21959991..21973501 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005162711.4XP_005162768.1  acyl-CoA thioesterase 9, tandem duplicate 1 isoform X1

      UniProtKB/TrEMBL
      F1R961
      Related
      ENSDARP00000037582.2, ENSDART00000030592.4
      Conserved Domains (1) summary
      cd03442
      Location:290410
      BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395172.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      148349..161508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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