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    mecom.L MDS1 and EVI1 complex locus L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 734157, updated on 27-Jan-2018

    Summary

    Official Symbol
    mecom.L
    Official Full Name
    MDS1 and EVI1 complex locus L homeolog
    Primary source
    Xenbase:XB-GENE-980198
    Locus tag
    XELAEV_180276081mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    evi1; evi-1; mecom; xEvi-1; mecom-a; mecom-b
    Annotation information
    Annotation category: partial on reference assembly

    Genomic context

    See mecom.L in Genome Data Viewer
    Location:
    chromosome: 5L
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (108994441..109029677)

    Chromosome 5L - NC_030732.1Genomic Context describing neighboring genes Neighboring gene myoneurin Neighboring gene myelodysplasia syndrome 1 Neighboring gene golgi integral membrane protein 4 L homeolog Neighboring gene transient receptor potential cation channel subfamily V member 6-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030732.1 Chromosome 5L Reference Xenopus_laevis_v2 Primary Assembly

    Pathways from BioSystems

    • MAPK signaling pathway, organism-specific biosystem (from KEGG)
      MAPK signaling pathway, organism-specific biosystemThe mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals e...
    • MAPK signaling pathway, conserved biosystem (from KEGG)
      MAPK signaling pathway, conserved biosystemThe mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals e...

    General protein information

    Preferred Names
    MDS1 and EVI1 complex locus protein EVI1-A
    Names
    ecotropic viral integration site 1
    ecotropic virus integration site 1 protein homolog-A
    myelodysplasia syndrome 1-ectopic viral integration site 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001095670.1NP_001089139.1  MDS1 and EVI1 complex locus protein EVI1-A

      See identical proteins and their annotated locations for NP_001089139.1

      Status: PROVISIONAL

      Source sequence(s)
      AY939893
      UniProtKB/Swiss-Prot
      B7ZRU9
      Conserved Domains (5) summary
      PHA00733
      Location:690786
      PHA00733; hypothetical protein
      sd00017
      Location:736756
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:734756
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:748772
      zf-H2C2_2; Zinc-finger double domain
      pfam15909
      Location:166245
      zf-C2H2_8; C2H2-type zinc ribbon

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030732.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      108994441..109029677
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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