Format

Send to:

Choose Destination
    • Showing Current items.

    PER1 period circadian regulator 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721948, updated on 4-Oct-2017

    Summary

    Gene symbol
    PER1
    Gene description
    period circadian regulator 1
    See related
    Ensembl:ENSMMUG00000021798
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs

    Genomic context

    See PER1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    102 current Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (8159591..8175578, complement)
    Build 1.2 previous assembly Mmul_051212 (GCF_000002255.3) 16 NC_007873.1 (7900510..7916386, complement)

    Chromosome 16 - NC_027908.1Genomic Context describing neighboring genes Neighboring gene transfer RNA leucine (anticodon UAG) Neighboring gene hes family bHLH transcription factor 7 Neighboring gene vesicle associated membrane protein 2 Neighboring gene transmembrane protein 107

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Circadian entrainment, organism-specific biosystem (from KEGG)
      Circadian entrainment, organism-specific biosystemCircadian entrainment is a fundamental property by which the period of the internal biological clock is entrained by recurring exogenous signals, such that the organism's endocrine and behavioral rhy...
    • Circadian entrainment, conserved biosystem (from KEGG)
      Circadian entrainment, conserved biosystemCircadian entrainment is a fundamental property by which the period of the internal biological clock is entrained by recurring exogenous signals, such that the organism's endocrine and behavioral rhy...
    • Circadian rhythm, organism-specific biosystem (from KEGG)
      Circadian rhythm, organism-specific biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In mammals, the circadian clock mechanism consists of ...
    • Circadian rhythm, conserved biosystem (from KEGG)
      Circadian rhythm, conserved biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In mammals, the circadian clock mechanism consists of ...
    • Herpes simplex infection, organism-specific biosystem (from KEGG)
      Herpes simplex infection, organism-specific biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...
    • Herpes simplex infection, conserved biosystem (from KEGG)
      Herpes simplex infection, conserved biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    period circadian protein homolog 1
    Names
    period circadian clock 1
    period homolog 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_8.0.1 Primary Assembly

    Genomic

    1. NC_027908.1 Reference Mmul_8.0.1 Primary Assembly

      Range
      8159591..8175578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015118551.1XP_014974037.1  period circadian protein homolog 1 isoform X3

      Related
      ENSMMUP00000028711.3, ENSMMUT00000030676.3
      Conserved Domains (3) summary
      cd00130
      Location:360461
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      pfam08447
      Location:373457
      PAS_3; PAS fold
      pfam12114
      Location:10831224
      Period_C; Period protein 2/3C-terminal region
    2. XM_015118550.1XP_014974036.1  period circadian protein homolog 1 isoform X2

      Conserved Domains (3) summary
      cd00130
      Location:437538
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      pfam08447
      Location:450534
      PAS_3; PAS fold
      pfam12114
      Location:11001241
      Period_C; Period protein 2/3C-terminal region
    3. XM_015118549.1XP_014974035.1  period circadian protein homolog 1 isoform X1

      Conserved Domains (3) summary
      cd00130
      Location:437538
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      pfam08447
      Location:450534
      PAS_3; PAS fold
      pfam12114
      Location:11601301
      Period_C; Period protein 2/3C-terminal region
    Support Center