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    AGPS alkylglycerone phosphate synthase [ Bos taurus (cattle) ]

    Gene ID: 613679, updated on 14-Jan-2019

    Summary

    Official Symbol
    AGPSprovided by VGNC
    Official Full Name
    alkylglycerone phosphate synthaseprovided by VGNC
    Primary source
    VGNC:VGNC:25739
    See related
    BGD:BT16561; Ensembl:ENSBTAG00000009897
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See AGPS in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 2 NC_037329.1 (19341271..19468233, complement)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 2 AC_000159.1 (19510421..19510691, complement) , (19339167..19433176, complement)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase SETMAR-like Neighboring gene tetratricopeptide repeat domain 30B Neighboring gene nuclear factor, erythroid 2 like 2 Neighboring gene protein tyrosine phosphatase type IVA 1 pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein A3 Neighboring gene microRNA mir-4444

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    alkyldihydroxyacetonephosphate synthase, peroxisomal
    NP_001193648.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206719.1NP_001193648.1  alkyldihydroxyacetonephosphate synthase, peroxisomal

      Status: VALIDATED

      Source sequence(s)
      AM032491, DY051231, DY085065, EE341874, EE353698, EV738513, GH322240, GH329950, NKLS02000002
      Related
      ENSBTAP00000068826.1, ENSBTAT00000081070.1
      Conserved Domains (3) summary
      COG0277
      Location:200652
      GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
      pfam01565
      Location:206347
      FAD_binding_4; FAD binding domain
      pfam02913
      Location:384657
      FAD-oxidase_C; FAD linked oxidases, C-terminal domain

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      19341271..19468233 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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