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    eif2a eukaryotic translation initiation factor 2A [ Danio rerio (zebrafish) ]

    Gene ID: 573991, updated on 14-Feb-2019

    Summary

    Official Symbol
    eif2aprovided by ZNC
    Official Full Name
    eukaryotic translation initiation factor 2Aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050626-52
    See related
    Ensembl:ENSDARG00000101061
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    im:7145971; zgc:110460
    Orthologs

    Genomic context

    See eif2a in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (3552641..3571568, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (3455556..3474483, complement)
    103 previous assembly Zv9 (GCF_000002035.4) 18 NC_007129.5 (2453819..2472746)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100538302 Neighboring gene DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) Neighboring gene stress-associated endoplasmic reticulum protein 1 Neighboring gene leucine-rich repeats and calponin homology (CH) domain containing 3

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    ribosome binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    tRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    translation initiation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    regulation of translation IEA
    Inferred from Electronic Annotation
    more info
     
    translation IEA
    Inferred from Electronic Annotation
    more info
     
    translational initiation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    eukaryotic translation initiation factor 2A
    Names
    eIF-2A

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025170.2NP_001020341.1  eukaryotic translation initiation factor 2A

      See identical proteins and their annotated locations for NP_001020341.1

      Status: PROVISIONAL

      Source sequence(s)
      BC096815
      UniProtKB/Swiss-Prot
      Q4QRJ7
      UniProtKB/TrEMBL
      B2GSC5
      Related
      ENSDARP00000132954.1, ENSDART00000168842.2
      Conserved Domains (2) summary
      pfam08662
      Location:215410
      eIF2A; Eukaryotic translation initiation factor eIF2A
      sd00039
      Location:275320
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      3552641..3571568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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