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    wwtr1 WW domain containing transcription regulator 1 [ Danio rerio (zebrafish) ]

    Gene ID: 568008, updated on 19-Apr-2019

    Summary

    Official Symbol
    wwtr1provided by ZNC
    Official Full Name
    WW domain containing transcription regulator 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-051101-1
    See related
    Ensembl:ENSDARG00000067719
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Orthologs

    Genomic context

    See wwtr1 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (38048943..38120728)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (38095543..38161984)
    103 previous assembly Zv9 (GCF_000002035.4) 22 NC_007133.5 (41007682..41073265)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 6 Neighboring gene COMM domain containing 2 Neighboring gene transmembrane 4 L six family member 4 Neighboring gene transmembrane 4 L six family member 18

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    transcription corepressor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    anterior/posterior pattern specification involved in pronephros development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    epithelial cell fate commitment IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    hippo signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    kidney development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of retinoic acid receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    retinal pigment epithelium development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    skeletal system development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    ventricular trabecula myocardium morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    WW domain-containing transcription regulator protein 1
    Names
    taz

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037696.1NP_001032785.1  WW domain-containing transcription regulator protein 1

      See identical proteins and their annotated locations for NP_001032785.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ238862
      UniProtKB/TrEMBL
      Q307I6
      Related
      ENSDARP00000088304.4, ENSDART00000097533.6
      Conserved Domains (1) summary
      smart00456
      Location:115146
      WW; Domain with 2 conserved Trp (W) residues

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      38048943..38120728
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005161848.4XP_005161905.1  WW domain-containing transcription regulator protein 1 isoform X1

      Conserved Domains (1) summary
      smart00456
      Location:115146
      WW; Domain with 2 conserved Trp (W) residues
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