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    bida BH3 interacting domain death agonist [ Danio rerio (zebrafish) ]

    Gene ID: 559425, updated on 13-Apr-2019

    Summary

    Official Symbol
    bidaprovided by ZNC
    Official Full Name
    BH3 interacting domain death agonistprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050419-35
    See related
    Ensembl:ENSDARG00000069290
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    bid; si:ch211-238n5.6

    Genomic context

    See bida in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (20566789..20572374)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (20577727..20583328)
    103 previous assembly Zv9 (GCF_000002035.4) 18 NC_007129.5 (20347528..20353085)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene si:ch211-238n5.4 Neighboring gene WEE1 homolog 2 (S. pombe) Neighboring gene BCL2 like 13 Neighboring gene wingless-type MMTV integration site family member 2

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Apoptosis, organism-specific biosystem (from KEGG)
      Apoptosis, organism-specific biosystemApoptosis is a genetically programmed process for the elimination of damaged or redundant cells by activation of caspases (aspartate-specific cysteine proteases). The onset of apoptosis is controlled...
    • Apoptosis, conserved biosystem (from KEGG)
      Apoptosis, conserved biosystemApoptosis is a genetically programmed process for the elimination of damaged or redundant cells by activation of caspases (aspartate-specific cysteine proteases). The onset of apoptosis is controlled...
    • p53 signaling pathway, organism-specific biosystem (from KEGG)
      p53 signaling pathway, organism-specific biosystemp53 activation is induced by a number of stress signals, including DNA damage, oxidative stress and activated oncogenes. The p53 protein is employed as a transcriptional activator of p53-regulated ge...
    • p53 signaling pathway, conserved biosystem (from KEGG)
      p53 signaling pathway, conserved biosystemp53 activation is induced by a number of stress signals, including DNA damage, oxidative stress and activated oncogenes. The p53 protein is employed as a transcriptional activator of p53-regulated ge...

    General protein information

    Preferred Names
    BH3 interacting domain death agonist

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079826.1NP_001073295.1  BH3 interacting domain death agonist

      See identical proteins and their annotated locations for NP_001073295.1

      Status: PROVISIONAL

      Source sequence(s)
      BX470166
      UniProtKB/TrEMBL
      Q1LX52
      Related
      ENSDARP00000155884.1, ENSDART00000182585.1
      Conserved Domains (1) summary
      pfam06393
      Location:13187
      BID; BH3 interacting domain (BID)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      20566789..20572374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005159109.4XP_005159166.1  BH3 interacting domain death agonist isoform X1

      See identical proteins and their annotated locations for XP_005159166.1

      UniProtKB/TrEMBL
      Q1LX52
      Related
      ENSDARP00000091489.4, ENSDART00000100716.7
      Conserved Domains (1) summary
      pfam06393
      Location:13187
      BID; BH3 interacting domain (BID)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395022.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      165696..170443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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