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    ufm1 ubiquitin-fold modifier 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 549742, updated on 20-Jun-2018

    Summary

    Symbol
    ufm1provided by Xenbase
    Full Name
    ubiquitin-fold modifier 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-973175
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See ufm1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (148214853..148224708, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668233.1 (94513266..94523121)

    Chromosome 2 - NC_030678.1Genomic Context describing neighboring genes Neighboring gene stomatin like 3 Neighboring gene FRAS1 related extracellular matrix protein 2 Neighboring gene transient receptor potential cation channel, subfamily C, member 4 Neighboring gene periostin, osteoblast specific factor

    Genomic regions, transcripts, and products

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016988.2NP_001016988.1  ubiquitin-fold modifier 1

      See identical proteins and their annotated locations for NP_001016988.1

      Status: PROVISIONAL

      Source sequence(s)
      CR848258
      UniProtKB/Swiss-Prot
      B3DL37
      Conserved Domains (1) summary
      cd01766
      Location:283
      Ufm1; Urm1-like ubiquitin domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030678.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      148214853..148224708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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