Format

Send to:

Choose Destination
    • Showing Current items.

    ETF1 eukaryotic translation termination factor 1 [ Bos taurus (cattle) ]

    Gene ID: 541077, updated on 21-Jan-2019

    Summary

    Official Symbol
    ETF1provided by VGNC
    Official Full Name
    eukaryotic translation termination factor 1provided by VGNC
    Primary source
    VGNC:VGNC:28617
    See related
    BGD:BT14849; Ensembl:ENSBTAG00000011415
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    RRF1
    Orthologs

    Genomic context

    See ETF1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 7 NC_037334.1 (49856676..49886194, complement)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 7 AC_000164.1 (51468923..51498427, complement)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101904825 Neighboring gene POU domain, class 5, transcription factor 1 pseudogene Neighboring gene early growth response 1 Neighboring gene small nucleolar RNA SNORD63 Neighboring gene heat shock protein family A (Hsp70) member 9 Neighboring gene catenin alpha 1 Neighboring gene cystathionase (cystathionine gamma-lyase) pseudogene

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    • Homologs of the ETF1 gene: The ETF1 gene is conserved in human, chimpanzee, Rhesus monkey, dog, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
    • Orthologs from Annotation Pipeline: 250 organisms have orthologs with human gene ETF1
    • Orthologs

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    translation termination factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
    Inferred from Electronic Annotation
    more info
     
    protein methylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    eukaryotic peptide chain release factor subunit 1
    Names
    eRF1
    eukaryotic release factor 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076254.1NP_001069722.1  eukaryotic peptide chain release factor subunit 1

      See identical proteins and their annotated locations for NP_001069722.1

      Status: PROVISIONAL

      Source sequence(s)
      BC119947
      UniProtKB/Swiss-Prot
      Q0VCX5
      Related
      ENSBTAP00000035133.2, ENSBTAT00000035255.3
      Conserved Domains (1) summary
      COG1503
      Location:11419
      eRF1; Peptide chain release factor 1 (eRF1) [Translation, ribosomal structure and biogenesis]

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      49856676..49886194 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005209423.4XP_005209480.1  eukaryotic peptide chain release factor subunit 1 isoform X1

      See identical proteins and their annotated locations for XP_005209480.1

      UniProtKB/Swiss-Prot
      Q0VCX5
      Conserved Domains (1) summary
      COG1503
      Location:11419
      eRF1; Peptide chain release factor 1 (eRF1) [Translation, ribosomal structure and biogenesis]
    Support Center