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    Dhrs1 dehydrogenase/reductase (SDR family) member 1 [ Mus musculus (house mouse) ]

    Gene ID: 52585, updated on 31-Jan-2019

    Summary

    Official Symbol
    Dhrs1provided by MGI
    Official Full Name
    dehydrogenase/reductase (SDR family) member 1provided by MGI
    Primary source
    MGI:MGI:1196314
    See related
    Ensembl:ENSMUSG00000002332
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW112170; D14Ertd484e; 1110029G07Rik
    Expression
    Ubiquitous expression in duodenum adult (RPKM 54.6), testis adult (RPKM 52.1) and 28 other tissues See more
    Orthologs

    Genomic context

    See Dhrs1 in Genome Data Viewer
    Location:
    14 C3; 14 28.19 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (55739020..55745684, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (56357857..56364521, complement)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene transglutaminase 1, K polypeptide Neighboring gene Rab geranylgeranyl transferase, a subunit Neighboring gene NOP9 nucleolar protein Neighboring gene cell death-inducing DNA fragmentation factor, alpha subunit-like effector B Neighboring gene leukotriene B4 receptor 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial inner membrane HDA PubMed 
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    dehydrogenase/reductase SDR family member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026819.3NP_081095.2  dehydrogenase/reductase SDR family member 1

      See identical proteins and their annotated locations for NP_081095.2

      Status: VALIDATED

      Source sequence(s)
      AI845580, AK003958, AK159964, BU963142
      Consensus CDS
      CCDS36934.1
      UniProtKB/Swiss-Prot
      Q99L04
      UniProtKB/TrEMBL
      Q3TVU9
      Related
      ENSMUSP00000002403.8, ENSMUST00000002403.9
      Conserved Domains (2) summary
      cd09763
      Location:5271
      DHRS1-like_SDR_c; human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs
      PRK08303
      Location:1271
      PRK08303; short chain dehydrogenase; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      55739020..55745684 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001781132.1 RNA Sequence

    2. XR_001781131.1 RNA Sequence

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