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    RAD1 RAD1 checkpoint DNA exonuclease [ Bos taurus (cattle) ]

    Gene ID: 518502, updated on 14-Jan-2019

    Summary

    Official Symbol
    RAD1provided by VGNC
    Official Full Name
    RAD1 checkpoint DNA exonucleaseprovided by VGNC
    Primary source
    VGNC:VGNC:33677
    See related
    BGD:BT16404; Ensembl:ENSBTAG00000019209
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See RAD1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 20 NC_037347.1 (39227867..39236707)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 20 AC_000177.1 (39265241..39274086)

    Chromosome 20 - NC_037347.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C21 Neighboring gene biogenesis of ribosomes BRX1 Neighboring gene tetratricopeptide repeat domain 23 like Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC112443006 Neighboring gene retinoic acid induced 14

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    cell cycle checkpoint protein RAD1
    Names
    RAD1 homolog
    NP_001179419.1
    XP_005221656.1
    XP_015314573.1
    XP_015314574.2
    XP_015314575.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192490.2NP_001179419.1  cell cycle checkpoint protein RAD1

      See identical proteins and their annotated locations for NP_001179419.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000020
      UniProtKB/TrEMBL
      E1BB72
      Related
      ENSBTAP00000025568.5, ENSBTAT00000025568.6
      Conserved Domains (1) summary
      pfam02144
      Location:16256
      Rad1; Repair protein Rad1/Rec1/Rad17

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037347.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      39227867..39236707
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015459088.2XP_015314574.2  cell cycle checkpoint protein RAD1 isoform X2

      Conserved Domains (1) summary
      pfam02144
      Location:16221
      Rad1; Repair protein Rad1/Rec1/Rad17
    2. XM_015459089.2XP_015314575.1  cell cycle checkpoint protein RAD1 isoform X3

      Conserved Domains (1) summary
      pfam02144
      Location:16221
      Rad1; Repair protein Rad1/Rec1/Rad17
    3. XM_005221599.4XP_005221656.1  cell cycle checkpoint protein RAD1 isoform X1

      See identical proteins and their annotated locations for XP_005221656.1

      UniProtKB/TrEMBL
      E1BB72
      Conserved Domains (1) summary
      pfam02144
      Location:16256
      Rad1; Repair protein Rad1/Rec1/Rad17
    4. XM_015459087.2XP_015314573.1  cell cycle checkpoint protein RAD1 isoform X1

      UniProtKB/TrEMBL
      E1BB72
      Conserved Domains (1) summary
      pfam02144
      Location:16256
      Rad1; Repair protein Rad1/Rec1/Rad17
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