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    LAT linker for activation of T cells [ Bos taurus (cattle) ]

    Gene ID: 514735, updated on 14-Jan-2019

    Summary

    Official Symbol
    LATprovided by VGNC
    Official Full Name
    linker for activation of T cellsprovided by VGNC
    Primary source
    VGNC:VGNC:50054
    See related
    BGD:BT14502; Ensembl:ENSBTAG00000021249
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See LAT in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 25 NC_037352.1 (25862047..25867009, complement)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 25 AC_000182.1 (26120762..26125709, complement)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein 13 pseudogene Neighboring gene tetraspanin-3 pseudogene Neighboring gene sphingolipid transporter 1 (putative) Neighboring gene nuclear factor of activated T cells 2 interacting protein

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    Clone Names

    • MGC157208

    General protein information

    Preferred Names
    linker for activation of T-cells family member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001104978.1NP_001098448.1  linker for activation of T-cells family member 1 precursor

      See identical proteins and their annotated locations for NP_001098448.1

      Status: PROVISIONAL

      Source sequence(s)
      BC149498
      UniProtKB/TrEMBL
      A6QPU8
      Related
      ENSBTAP00000028315.4, ENSBTAT00000028315.5
      Conserved Domains (1) summary
      pfam15234
      Location:27254
      LAT; Linker for activation of T-cells

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      25862047..25867009 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024984829.1XP_024840597.1  linker for activation of T-cells family member 1 isoform X5

      Conserved Domains (1) summary
      pfam15234
      Location:1204
      LAT; Linker for activation of T-cells
    2. XM_005224905.4XP_005224962.1  linker for activation of T-cells family member 1 isoform X1

      See identical proteins and their annotated locations for XP_005224962.1

      Conserved Domains (1) summary
      pfam15234
      Location:27280
      LAT; Linker for activation of T-cells
    3. XM_010819416.3XP_010817718.1  linker for activation of T-cells family member 1 isoform X3

      Conserved Domains (1) summary
      pfam15234
      Location:27253
      LAT; Linker for activation of T-cells
    4. XM_005224906.4XP_005224963.1  linker for activation of T-cells family member 1 isoform X2

      See identical proteins and their annotated locations for XP_005224963.1

      Conserved Domains (1) summary
      pfam15234
      Location:27279
      LAT; Linker for activation of T-cells
    5. XM_024984828.1XP_024840596.1  linker for activation of T-cells family member 1 isoform X4

      Conserved Domains (1) summary
      pfam15234
      Location:27222
      LAT; Linker for activation of T-cells
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