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    efna1 ephrin-A1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 496637, updated on 20-Jun-2018

    Summary

    Official Symbol
    efna1provided by Xenbase
    Official Full Name
    ephrin-A1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5942499
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    b61; efl1; ecklg; epha1; eplg1; lerk1; xelfa; xelf-a; efna1-a; efna1-b; tnfaip4; Xefrin-A1
    Annotation information
    Annotation category: partial on reference assembly

    Genomic context

    See efna1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016688202.1 (745..1822, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004673735.1 (745..1822, complement)

    NW_016688202.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001011206.1NP_001011206.1  ephrin-A1 precursor

      See identical proteins and their annotated locations for NP_001011206.1

      Status: PROVISIONAL

      Source sequence(s)
      BC087755
      UniProtKB/TrEMBL
      Q5M906
      Conserved Domains (1) summary
      cd10425
      Location:19147
      Ephrin-A_Ectodomain; Ectodomain of Ephrin A

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NW_016688202.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      745..1822 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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