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    ASIP agouti signaling protein [ Canis lupus familiaris (dog) ]

    Gene ID: 492296, updated on 26-Sep-2018

    Summary

    Official Symbol
    ASIPprovided by VGNC
    Official Full Name
    agouti signaling proteinprovided by VGNC
    Primary source
    VGNC:VGNC:38182
    See related
    Ensembl:ENSCAFG00000024967
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    agouti
    Orthologs

    Genomic context

    See ASIP in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 24 NC_006606.3 (23338757..23393913)

    Chromosome 24 - NC_006606.3Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2 subunit beta Neighboring gene uncharacterized LOC106557714 Neighboring gene adenosylhomocysteinase Neighboring gene 40S ribosomal protein S21 pseudogene

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006606.3 Chromosome 24 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Adipogenesis, organism-specific biosystem (from WikiPathways)
      Adipogenesis, organism-specific biosystemThe different classess of factors involved in adipogenesis are shown. Adipogenesis is the process by which fat cells differentiate from predadipocytes to adipocytes (fat cells). Adipose tissue, compo...
    • Melanogenesis, organism-specific biosystem (from KEGG)
      Melanogenesis, organism-specific biosystemCutaneous melanin pigment plays a critical role in camouflage, mimicry, social communication, and protection against harmful effects of solar radiation. Melanogenesis is under complex regulatory cont...
    • Melanogenesis, conserved biosystem (from KEGG)
      Melanogenesis, conserved biosystemCutaneous melanin pigment plays a critical role in camouflage, mimicry, social communication, and protection against harmful effects of solar radiation. Melanogenesis is under complex regulatory cont...

    General gene information

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    agouti-signaling protein
    Names
    ASP
    agouti signal peptide
    agouti signaling protein, nonagouti homolog
    agouti switch protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007263.1NP_001007264.1  agouti-signaling protein precursor

      See identical proteins and their annotated locations for NP_001007264.1

      Status: PROVISIONAL

      Source sequence(s)
      AY714374
      UniProtKB/Swiss-Prot
      Q5UK76
      Related
      ENSCAFP00000034367.2, ENSCAFT00000038625.2
      Conserved Domains (1) summary
      smart00792
      Location:16127
      Agouti; Agouti protein

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006606.3 Reference CanFam3.1 Primary Assembly

      Range
      23338757..23393913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014106843.2XP_013962318.1  agouti-signaling protein isoform X1

      UniProtKB/TrEMBL
      F1PPY1
      Conserved Domains (1) summary
      smart00792
      Location:16127
      Agouti; Agouti protein
    2. XM_022408820.1XP_022264528.1  agouti-signaling protein isoform X1

      Conserved Domains (1) summary
      smart00792
      Location:16127
      Agouti; Agouti protein
    3. XM_022408819.1XP_022264527.1  agouti-signaling protein isoform X1

      Conserved Domains (1) summary
      smart00792
      Location:16127
      Agouti; Agouti protein
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