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    SNAPC4 small nuclear RNA activating complex polypeptide 4 [ Canis lupus familiaris (dog) ]

    Gene ID: 491251, updated on 26-Sep-2018

    Summary

    Official Symbol
    SNAPC4provided by VGNC
    Official Full Name
    small nuclear RNA activating complex polypeptide 4provided by VGNC
    Primary source
    VGNC:VGNC:46593
    See related
    Ensembl:ENSCAFG00000019683
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See SNAPC4 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 9 NC_006591.3 (49090615..49110763)

    Chromosome 9 - NC_006591.3Genomic Context describing neighboring genes Neighboring gene peptidase, mitochondrial processing alpha subunit Neighboring gene endosome associated trafficking regulator 1 Neighboring gene caspase recruitment domain family member 9 Neighboring gene DNL-type zinc finger

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006591.3 Chromosome 9 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    snRNA-activating protein complex subunit 4

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006591.3 Reference CanFam3.1 Primary Assembly

      Range
      49090615..49110763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022423580.1XP_022279288.1  snRNA-activating protein complex subunit 4 isoform X1

      Related
      ENSCAFP00000037665.1, ENSCAFT00000047346.2
      Conserved Domains (4) summary
      smart00717
      Location:453496
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam13921
      Location:404464
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      cl21498
      Location:290339
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
      cl26464
      Location:7901159
      Atrophin-1; Atrophin-1 family
    2. XM_014116932.2XP_013972407.1  snRNA-activating protein complex subunit 4 isoform X1

      UniProtKB/TrEMBL
      J9NSI5
      Conserved Domains (4) summary
      smart00717
      Location:453496
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam13921
      Location:404464
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      cl21498
      Location:290339
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
      cl26464
      Location:7901159
      Atrophin-1; Atrophin-1 family
    3. XM_005625115.3XP_005625172.1  snRNA-activating protein complex subunit 4 isoform X1

      UniProtKB/TrEMBL
      J9NSI5
      Conserved Domains (4) summary
      smart00717
      Location:453496
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam13921
      Location:404464
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      cl21498
      Location:290339
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
      cl26464
      Location:7901159
      Atrophin-1; Atrophin-1 family
    4. XM_014116933.2XP_013972408.1  snRNA-activating protein complex subunit 4 isoform X2

      Conserved Domains (4) summary
      smart00717
      Location:401448
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      cd00167
      Location:455496
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
      pfam13921
      Location:404464
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      cl21498
      Location:290339
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    5. XM_014116930.2XP_013972405.1  snRNA-activating protein complex subunit 4 isoform X1

      UniProtKB/TrEMBL
      J9NSI5
      Conserved Domains (4) summary
      smart00717
      Location:453496
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam13921
      Location:404464
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      cl21498
      Location:290339
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
      cl26464
      Location:7901159
      Atrophin-1; Atrophin-1 family
    6. XM_014116931.2XP_013972406.1  snRNA-activating protein complex subunit 4 isoform X1

      UniProtKB/TrEMBL
      J9NSI5
      Conserved Domains (4) summary
      smart00717
      Location:453496
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam13921
      Location:404464
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      cl21498
      Location:290339
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
      cl26464
      Location:7901159
      Atrophin-1; Atrophin-1 family
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